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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932141.1_cds_XP_016478727.1_70342
CDS Infomation

[gene=LOC107800094] [db_xref=GeneID:107800094] [protein=hippocampus abundant transcript-like protein 1 isoform X4] [protein_id=XP_016478727.1] [location=complement(join(5219..5269,5928..6008,6113..6199,6303..6378,7460..7668,7765..7887,7993..8105,8393..8504,8584..8751))] [gbkey=CDS]
Sequence

ATGGATAGTAAGATTAGAAGTTTGAAACATCTGTTTGTGACAGTGTTTCTCTCTAATTTT
GCGTTAAATGTGGTGACTCCAGCAATGACTGATATCACTATGGACGCACTTTGCCCTTCT
CAAGACAAATGCTCTCTTGCCATTTATCTTTCTGGTTTACAGCAGGCTATTATGGGGCTT
GGATCAATGTTGATGATGCCACTGATTGGAAACTTATCTGATGTATATGGAAGAAAAGCT
CTGCTCATTGTCCCTGTCACTGCTTCCATTCTTCCTTCTGTAATAATGGCATATAAGAGG
ACCACAAACTATTTCTATGCCTACTATGTCGTAAGGACCCTGACTGGCATGCTCAGCGAT
ACTGGCATTCAGTGCCTCCCCATTGCTTATGCGGCAGATTGTATATCAGAAGAGAAGCGT
GCTTCTGCGATTGGAGTTGTGGCGGGTGTAGGCTCTGCTGCATATTTTTGTGGTACCTTT
GCTGTTCGTTTCCTCTCCACTGCTCAAATATTTCTGGTGTCATCCATTTCTTCAACGGCC
GCGGCAGTATACATGACAATATTTCTAAAGGAGACGACTCGTCATATTAATATCGACGAA
GATGCTCTCAATCAACCCATATTAGCTAATGGCGCCGATGACTCTGAAAGTGACTCCTCA
GAGAAAAGGCTGAGTCCTAAAAATATTCCATCATTTTACCATATTATTAGCTTGCTCAAA
AGTAGCACCACACTTTCACTAGCAACATTAATTGCATTCTTGAATGGTCTTGCTGAGGGT
GGAATACAAACTCCATTTATGTACTTCTTAAGGGCTCGATTTCAATACAACAAAGACAAT
TTTGCTATTTTAATGTTGATTTGCTACGGTGGAGCAACATTTTCTCAGTTGATCTTAGTG
CCTAAGTTGGCTCCTATAATACGAGAAGAGACGATACTTTCCTTGGCGCTCATAGCTGGT
TTTACCAATTGTCAGCAAATAACTAGTATCTATAACAAAAATGGGAGACAAGAAAAATGA

Peptide Sequence

PEP ID

XP_016478727.1
PEP Infomation

PREDICTED: hippocampus abundant transcript-like protein 1 isoform X4 [Nicotiana tabacum]
Sequence

MDSKIRSLKHLFVTVFLSNFALNVVTPAMTDITMDALCPSQDKCSLAIYLSGLQQAIMGL
GSMLMMPLIGNLSDVYGRKALLIVPVTASILPSVIMAYKRTTNYFYAYYVVRTLTGMLSD
TGIQCLPIAYAADCISEEKRASAIGVVAGVGSAAYFCGTFAVRFLSTAQIFLVSSISSTA
AAVYMTIFLKETTRHINIDEDALNQPILANGADDSESDSSEKRLSPKNIPSFYHIISLLK
SSTTLSLATLIAFLNGLAEGGIQTPFMYFLRARFQYNKDNFAILMLICYGGATFSQLILV
PKLAPIIREETILSLALIAGFTNCQQITSIYNKNGRQEK

Transcript Sequence

Gene sequence data has not been registered.